BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025F05LP1|AL428417
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1790 0.0
>3x_Contig1800
Length = 38778
Score = 1790 bits (903), Expect = 0.0
Identities = 906/907 (99%)
Strand = Plus / Minus
Query: 4 agatatttaacaactagatcatcagttgctaataacataactctgtagtgttcatcacag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28027 agatatttaacaactagatcatcagttgctaataacataactctgtagtgttcatcacag 27968
Query: 64 cttcttatatacgttttgatttcctatgatagaagactcaattggtgttcaaaaccctgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27967 cttcttatatacgttttgatttcctatgatagaagactcaattggtgttcaaaaccctgt 27908
Query: 124 atgcgtgttgaaattgataagtggatatagataaaggaagaacataagtgcatttccctg 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27907 atgcgttttgaaattgataagtggatatagataaaggaagaacataagtgcatttccctg 27848
Query: 184 acgtcaaacagatctttagatcctaatcaacattcaagggattaatcttagatatccatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27847 acgtcaaacagatctttagatcctaatcaacattcaagggattaatcttagatatccatt 27788
Query: 244 atcctaatcttcgtcataacttaaagcagaacaaaatctgaccaactctaactggtattc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27787 atcctaatcttcgtcataacttaaagcagaacaaaatctgaccaactctaactggtattc 27728
Query: 304 ctttagagctgcaactgtaatttccccattctatccacgccagcagctgtcctggccgat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27727 ctttagagctgcaactgtaatttccccattctatccacgccagcagctgtcctggccgat 27668
Query: 364 aacctgatcttgccatgcacaaagagaaaagaaatcaatattgggaacagttacggcaac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27667 aacctgatcttgccatgcacaaagagaaaagaaatcaatattgggaacagttacggcaac 27608
Query: 424 tcataatcaaaaatccccaaacaacgcctgcgtaatctagcatatctcaacggccaaact 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27607 tcataatcaaaaatccccaaacaacgcctgcgtaatctagcatatctcaacggccaaact 27548
Query: 484 acctacccttaattctcatcaaagcgggcagcgctttcctcccccaatggataaagctaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27547 acctacccttaattctcatcaaagcgggcagcgctttcctcccccaatggataaagctaa 27488
Query: 544 gtccatttccacatactgcattcggtttgttaagcagtgtcctctcattttgcaaccaac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27487 gtccatttccacatactgcattcggtttgttaagcagtgtcctctcattttgcaaccaac 27428
Query: 604 tggacaactggacaactggattaaatcaaaaaatcaaacttctgcctttctgcgcttctg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27427 tggacaactggacaactggattaaatcaaaaaatcaaacttctgcctttctgcgcttctg 27368
Query: 664 cgctactataactgctagtaacgaaaatctgtctttagatatcggaagcttaatctgtaa 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27367 cgctactataactgctagtaacgaaaatctgtctttagatatcggaagcttaatctgtaa 27308
Query: 724 tcatcatagaactgattaagttgatgcaatttaaaccactttcccgaaaaggaaggtcgg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27307 tcatcatagaactgattaagttgatgcaatttaaaccactttcccgaaaaggaaggtcgg 27248
Query: 784 aaaataatgtgtaaaacgttaagtaaccaaactctaccaatgttccgagaggaatcataa 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27247 aaaataatgtgtaaaacgttaagtaaccaaactctaccaatgttccgagaggaatcataa 27188
Query: 844 tgaatcagagtgttgcgtctctctgaacaatcctactcggtgataatgtaatgaccttta 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27187 tgaatcagagtgttgcgtctctctgaacaatcctactcggtgataatgtaatgaccttta 27128
Query: 904 aacttgc 910
|||||||
Sbjct: 27127 aacttgc 27121
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6307
Number of Sequences: 1807
Number of extensions: 6307
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)